CDS

Accession Number TCMCG027C06751
gbkey CDS
Protein Id XP_035543338.1
Location complement(join(36301931..36302011,36302104..36302219,36302445..36302468,36302554..36302585,36303169..36303260,36303358..36303411,36303732..36303793,36303902..36303963,36304243..36304329,36304422..36304498,36305044..36305102,36305224..36305288,36305384..36305473,36305588..36305684,36306247..36306346,36306435..36306508,36307307..36307388,36307482..36307532,36308740..36308817,36308918..36308962,36309094..36309195,36309996..36310052,36310530..36310616,36310914..36310971,36311059..36311090,36311166..36311193,36311260..36311361,36311494..36311648,36311974..36312037,36312773..36312845,36312918..36312998,36313771..36313865,36315046..36315077,36316008..36316043))
Gene LOC108984317
GeneID 108984317
Organism Juglans regia

Protein

Length 809aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA350852
db_source XM_035687445.1
Definition DNA mismatch repair protein MSH5 [Juglans regia]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08741        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000710        [VIEW IN EMBL-EBI]
GO:0000712        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010777        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043073        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051026        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051307        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGAAATGGACGAAACCGAAGCGGTACCTCAGGTTTACATGGCATGCATTCAACACGGCCATCGAGTTGGAGTTTCCTTTTATGATCCCAGTATCCGCCAACTTCATGTGCTTGAAGTTTGGGAAGGTAGTAGCACGGAATTTCCCTTGATTGATCTAGTAAAATATCAAGCAAAGCCACTGATCATTTACACAAGCACTAAAAGTGAAGAATTCTTTTTGTGTGCTTTACAACGTAGTGATGGAACAACCGAGGCTCCCACTGTGAAGCTTGTGAAAAGTTCAATTTTCAGCTATGAGCAAGCATGGCACAGGTTGATATACCTTCGAGTGGCAGGAATGGATGATGGATTAAACATCAAAGAGAGGGTTTGTTATCTGAGTTCCATGATGGACATGGGAAGTGATGTTCAAGTTCGTGCAAGTGGGGGTCTTCTTGCGATATTGGAGAATGAAAGGATTGTGGATACCCTGGAACAAAAGGAATGTGGCAATGCATCAATCGCAATTGATTCCGTGATAGAAATTTCATTAAATAATTTTCTCAAACTCGATGCAGCAGCTCACGAGGCATTACAGATTTTCCAAATAGACAAACATCCTAGCCATATGGGCATTGGTAGAGCAAAAGAAGGGTTCTCCGTGTTTGGCGTGATGAATAAGTGCGTAACACCAATGGGTAGACGCCTCTTGAGAAGCTGGTTCATGAGGCCTATACTAGACATTGAAAATTTAAACAGGCGGCTCAATGCGATATCTTTCTTTCTTTTCTCTGAAGATCTGATGGCTTCCTTACGTGAAACTCTGAAGTCTGTAAAGGACATTCCTCACATACTCAAGAAATTCAACTCCCCAAGCTCTAAATGCACATGCAGCGACTGGACAGCTTTTCTAAAGAGTGTTTGCTCACTATTGCACGTGAGCAAGATATTTGAAGTGGGGATTTCTGAAAGTCTTAGAGAGCATGTGAAGCATTTCAACTTGGACATTGTTGAGGAGGCTGCTTCATACATTCCAACAGAGCTAGCTTACATCTATGAATTGGTAATTGGTGTTCTTGATGTCAATAGAGGTAAAGAAAAGGGTTATGAAACCATCGTGAAAGAGTGTTTTTGTGATGAGTTGGATGAGCTGAGGCAAATATACGAGGAACTACCAGAATTTCTGGAGGAGTTGTCATCATTGGAACGGGCACAACTTCCTCATCTATGTAAAGACAAGCTTGTTCCTTGTATTGTTTATATACAGCAAATAGGATACTTGATGTGCTTTTTTGAAGAAAACCTTGATGAAGCCACACTGGTGGAACTTCAAGATTTTGTGTTTGCTTTCTCTGATGTGGATGGGGAGACAAAAAGATTCTTTTACCGTACCCCAAAGACAAGAGAACTGGATGACCTGCTTGGAGATATCTATCATAAAATCCTAGATATGGAGAGGGCAATTACTAGAGATCTGGTGTCACATATTCTTCTATTCTCAACCCATTTGCTCAAGGCCATCAATTTTGCGGCCAAACTTGATTGCCTTTTGTCATTAGCACTTGTTGCTCGTCAAAACAATTATGTAAGGCCTACTTTGACTACAGAAAGCTTGCTTAATATTCAAAATGGAAGGCATATTTTGCAGGAAATGACAGTAGATACATTTATTCCAAATGACACAAAGATACTTGATGATGGAAGAATTCAAATCATCACTGGTCCTAATTATTCGGGGAAAAGTATCTATGTAAAGCAGGTAGCTTTAATTGTTTTCCTCTCCCACATTGGAAGTTTTGTTCCTGCAGATGCTGCAACTGTGGGTTTGACTGATAGGATATTCTGCGCAATGGGAAGCAAGTTTATGACTGCAGAACTGTCAACCTTCATGATTGATCTGCATCAAGTAGGGATGATGCTAAGGCATGCAACTTCACGATCTTTGTGTCTACTGGATGAGTTTGGTAAAGGTACTCTTACAGAAGATGGCATTGGGCTGCTTGGTGGAACCATAACTCACTTTGCCACGTGTGATGACCCCCCAAAGGTTCTGGTGTGTACTCATTTGACTGAGATATTTGATAAGAGTTGCCTACCAAAGTCTGAGACTGAGATGATCAGCTTTTACACCATGAGTGTGCTGAGGCCTGACAACAATTCTACGAATATCGAAGACATTGTGTTTCTATATCGGCTTGTTCCCGGACATGCACTTCTAAGCTATGGGCTGCATTGTGCACAACTTGCAGGTGTCCCTGGGGAAGTCATAAAGCGAGCAGCGTTTGTGTTGGATGCCATCGGGAATAATAAGCATGTTGAGCGATTGAGCAATGAGAATATATCAGCTCAAGATCGGCAATACAAGGACGCAGCGGGCAAGATTTTGGAGTTTGATGTTTCCAAGGGGGACCTCAGCCTTTTCTTTCAGGATATATTTCCATCTTAA
Protein:  
MEEMDETEAVPQVYMACIQHGHRVGVSFYDPSIRQLHVLEVWEGSSTEFPLIDLVKYQAKPLIIYTSTKSEEFFLCALQRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVAGMDDGLNIKERVCYLSSMMDMGSDVQVRASGGLLAILENERIVDTLEQKECGNASIAIDSVIEISLNNFLKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGVMNKCVTPMGRRLLRSWFMRPILDIENLNRRLNAISFFLFSEDLMASLRETLKSVKDIPHILKKFNSPSSKCTCSDWTAFLKSVCSLLHVSKIFEVGISESLREHVKHFNLDIVEEAASYIPTELAYIYELVIGVLDVNRGKEKGYETIVKECFCDELDELRQIYEELPEFLEELSSLERAQLPHLCKDKLVPCIVYIQQIGYLMCFFEENLDEATLVELQDFVFAFSDVDGETKRFFYRTPKTRELDDLLGDIYHKILDMERAITRDLVSHILLFSTHLLKAINFAAKLDCLLSLALVARQNNYVRPTLTTESLLNIQNGRHILQEMTVDTFIPNDTKILDDGRIQIITGPNYSGKSIYVKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGSKFMTAELSTFMIDLHQVGMMLRHATSRSLCLLDEFGKGTLTEDGIGLLGGTITHFATCDDPPKVLVCTHLTEIFDKSCLPKSETEMISFYTMSVLRPDNNSTNIEDIVFLYRLVPGHALLSYGLHCAQLAGVPGEVIKRAAFVLDAIGNNKHVERLSNENISAQDRQYKDAAGKILEFDVSKGDLSLFFQDIFPS